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Mutations in PIK3R1 cause SHORT syndrome

journal contribution
posted on 2023-06-08, 15:25 authored by David A Dyment, Amanda C Smith, Diana AlcantaraDiana Alcantara, Jeremy A Schwartzentruber, Lina Basel-Vanagaite, Cynthia J Curry, I Karen Temple, William Reardon, Sahar Mansour, Mushfequr R Haq, Rodney Gilbert, Ordan J Lehmann, Megan R Vanstone, Chandree L Beaulieu, FORGE Canada Consortium, Jacek Majewski, Dennis E Bulman, Mark O'DriscollMark O'Driscoll, Kym M Boycott, A Micheil Inness
SHORT syndrome is a rare, multisystem disease characterized by short stature, anterior-chamber eye anomalies, characteristic facial features, lipodystrophy, hernias, hyperextensibility, and delayed dentition. As part of the FORGE (Finding of Rare Disease Genes) Canada Consortium, we studied individuals with clinical features of SHORT syndrome to identify the genetic etiology of this rare disease. Whole-exome sequencing in a family trio of an affected child and unaffected parents identified a de novo frameshift insertion, c.1906_1907insC (p.Asn636Thrfs(*)18), in exon 14 of PIK3R1. Heterozygous mutations in exon 14 of PIK3R1 were subsequently identified by Sanger sequencing in three additional affected individuals and two affected family members. One of these mutations, c.1945C>T (p.Arg649Trp), was confirmed to be a de novo mutation in one affected individual and was also identified and shown to segregate with the phenotype in an unrelated family. The other mutation, a de novo truncating mutation (c.1971T>G [p.Tyr657(*)]), was identified in another affected individual. PIK3R1 is involved in the phosphatidylinositol 3 kinase (PI3K) signaling cascade and, as such, plays an important role in cell growth, proliferation, and survival. Functional studies on lymphoblastoid cells with the PIK3R1 c.1906_1907insC mutation showed decreased phosphorylation of the downstream S6 target of the PI3K-AKT-mTOR pathway. Our findings show that PIK3R1 mutations are the major cause of SHORT syndrome and suggest that the molecular mechanism of disease might involve downregulation of the PI3K-AKT-mTOR pathway.

History

Publication status

  • Published

File Version

  • Published version

Journal

American Journal of Human Genetics

ISSN

0002-9297

Publisher

Elsevier

Issue

1

Volume

93

Page range

158-166

Department affiliated with

  • Sussex Centre for Genome Damage Stability Publications

Full text available

  • No

Peer reviewed?

  • Yes

Legacy Posted Date

2013-07-19

First Open Access (FOA) Date

2013-07-19

First Compliant Deposit (FCD) Date

2013-07-19

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